Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ChkbO55229 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ChkbO55229 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ChkbO55229 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ChkbO55229 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ChkbO55229 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ChkbO55229 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ChkbO55229 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ChkbO55229 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ChkbO55229 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ChkbO55229 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ChkbO55229 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.01■□□□□ 0.95
ChkbO55229 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ChkbO55229 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21■□□□□ 0.95
ChkbO55229 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21■□□□□ 0.95
ChkbO55229 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChkbO55229 Gm7417-201ENSMUST00000192950 473 ntBASIC20.99■□□□□ 0.95
ChkbO55229 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.99■□□□□ 0.95
ChkbO55229 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChkbO55229 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
ChkbO55229 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.99■□□□□ 0.95
ChkbO55229 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChkbO55229 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkbO55229 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkbO55229 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkbO55229 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkbO55229 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.98■□□□□ 0.95
ChkbO55229 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.98■□□□□ 0.95
ChkbO55229 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChkbO55229 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.98■□□□□ 0.95
ChkbO55229 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ChkbO55229 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkbO55229 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkbO55229 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkbO55229 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkbO55229 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkbO55229 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.96■□□□□ 0.95
ChkbO55229 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChkbO55229 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.96■□□□□ 0.95
ChkbO55229 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.95■□□□□ 0.94
ChkbO55229 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.95■□□□□ 0.94
ChkbO55229 Gm10399-202ENSMUST00000202768 748 ntBASIC20.95■□□□□ 0.94
ChkbO55229 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ChkbO55229 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ChkbO55229 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChkbO55229 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ChkbO55229 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.94■□□□□ 0.94
ChkbO55229 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.94■□□□□ 0.94
ChkbO55229 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.94■□□□□ 0.94
ChkbO55229 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ChkbO55229 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.94■□□□□ 0.94
ChkbO55229 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ChkbO55229 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkbO55229 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ChkbO55229 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ChkbO55229 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ChkbO55229 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.93■□□□□ 0.94
ChkbO55229 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkbO55229 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms