Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ccr6O54689 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccr6O54689 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccr6O54689 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccr6O54689 Scarna2-201ENSMUST00000157560 414 ntBASIC16.65■□□□□ 0.26
Ccr6O54689 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccr6O54689 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccr6O54689 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccr6O54689 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccr6O54689 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccr6O54689 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Ccr6O54689 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccr6O54689 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccr6O54689 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccr6O54689 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccr6O54689 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccr6O54689 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccr6O54689 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccr6O54689 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccr6O54689 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ccr6O54689 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccr6O54689 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccr6O54689 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccr6O54689 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccr6O54689 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccr6O54689 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.62■□□□□ 0.25
Ccr6O54689 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccr6O54689 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccr6O54689 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccr6O54689 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.61■□□□□ 0.25
Ccr6O54689 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccr6O54689 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccr6O54689 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccr6O54689 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccr6O54689 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccr6O54689 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccr6O54689 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.61■□□□□ 0.25
Ccr6O54689 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccr6O54689 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccr6O54689 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccr6O54689 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccr6O54689 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.6■□□□□ 0.25
Ccr6O54689 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.59■□□□□ 0.25
Ccr6O54689 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccr6O54689 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccr6O54689 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccr6O54689 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccr6O54689 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.59■□□□□ 0.25
Ccr6O54689 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.58■□□□□ 0.25
Ccr6O54689 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccr6O54689 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 BC021767-201ENSMUST00000126387 1716 ntBASIC16.58■□□□□ 0.24
Ccr6O54689 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Ccr6O54689 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 Rarb-207ENSMUST00000225921 2756 ntBASIC16.58■□□□□ 0.24
Ccr6O54689 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccr6O54689 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccr6O54689 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Ccr6O54689 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccr6O54689 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccr6O54689 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ccr6O54689 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.57■□□□□ 0.24
Ccr6O54689 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms