Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.74■■□□□ 1.07
Sptlc1O35704 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sptlc1O35704 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
Sptlc1O35704 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.73■■□□□ 1.07
Sptlc1O35704 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Sptlc1O35704 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.73■■□□□ 1.07
Sptlc1O35704 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.73■■□□□ 1.07
Sptlc1O35704 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sptlc1O35704 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sptlc1O35704 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Sptlc1O35704 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.72■■□□□ 1.07
Sptlc1O35704 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.72■■□□□ 1.07
Sptlc1O35704 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sptlc1O35704 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sptlc1O35704 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Sptlc1O35704 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc1O35704 Gm9988-201ENSMUST00000069786 435 ntBASIC21.71■■□□□ 1.07
Sptlc1O35704 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc1O35704 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
Sptlc1O35704 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc1O35704 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sptlc1O35704 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.71■■□□□ 1.07
Sptlc1O35704 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.7■■□□□ 1.07
Sptlc1O35704 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.7■■□□□ 1.06
Sptlc1O35704 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.7■■□□□ 1.06
Sptlc1O35704 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.7■■□□□ 1.06
Sptlc1O35704 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
Sptlc1O35704 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sptlc1O35704 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Sptlc1O35704 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Sptlc1O35704 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.69■■□□□ 1.06
Sptlc1O35704 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc1O35704 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc1O35704 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc1O35704 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.69■■□□□ 1.06
Sptlc1O35704 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc1O35704 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Sptlc1O35704 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.68■■□□□ 1.06
Sptlc1O35704 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.68■■□□□ 1.06
Sptlc1O35704 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sptlc1O35704 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Sptlc1O35704 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc1O35704 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc1O35704 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc1O35704 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc1O35704 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.67■■□□□ 1.06
Sptlc1O35704 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sptlc1O35704 Reep4-203ENSMUST00000226563 1444 ntBASIC21.67■■□□□ 1.06
Sptlc1O35704 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.67■■□□□ 1.06
Sptlc1O35704 Gm27801-201ENSMUST00000184174 223 ntBASIC21.67■■□□□ 1.06
Sptlc1O35704 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sptlc1O35704 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Sptlc1O35704 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sptlc1O35704 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc1O35704 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc1O35704 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.66■■□□□ 1.06
Sptlc1O35704 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.66■■□□□ 1.06
Sptlc1O35704 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc1O35704 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc1O35704 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sptlc1O35704 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sptlc1O35704 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Sptlc1O35704 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Sptlc1O35704 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sptlc1O35704 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Sptlc1O35704 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.65■■□□□ 1.06
Sptlc1O35704 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms