Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
B020004C17RikJ3QP07 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
B020004C17RikJ3QP07 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.42■■□□□ 1.18
B020004C17RikJ3QP07 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
B020004C17RikJ3QP07 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
B020004C17RikJ3QP07 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
B020004C17RikJ3QP07 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
B020004C17RikJ3QP07 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
B020004C17RikJ3QP07 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
B020004C17RikJ3QP07 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
B020004C17RikJ3QP07 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
B020004C17RikJ3QP07 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
B020004C17RikJ3QP07 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.39■■□□□ 1.17
B020004C17RikJ3QP07 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
B020004C17RikJ3QP07 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
B020004C17RikJ3QP07 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Gm7290-201ENSMUST00000104990 617 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Gm12918-201ENSMUST00000120234 636 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Gm15710-201ENSMUST00000121821 636 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Gm10653-202ENSMUST00000139570 835 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Gm5075-201ENSMUST00000196916 622 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
B020004C17RikJ3QP07 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
B020004C17RikJ3QP07 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
B020004C17RikJ3QP07 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
B020004C17RikJ3QP07 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Gm20760-201ENSMUST00000179197 648 ntBASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
B020004C17RikJ3QP07 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
B020004C17RikJ3QP07 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
B020004C17RikJ3QP07 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms