Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-3J3QMG8 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.46■□□□□ 0.39
Trav13d-3J3QMG8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-3J3QMG8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-3J3QMG8 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.46■□□□□ 0.39
Trav13d-3J3QMG8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
Trav13d-3J3QMG8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Trav13d-3J3QMG8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-3J3QMG8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-3J3QMG8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.42■□□□□ 0.38
Trav13d-3J3QMG8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-3J3QMG8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13d-3J3QMG8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav13d-3J3QMG8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Gm21956-201ENSMUST00000179946 522 ntBASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-3J3QMG8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Gm13241-201ENSMUST00000094493 780 ntBASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Trav13d-3J3QMG8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 209.3 ms