Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm17535J3KMR8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Gm11421-201ENSMUST00000122124 294 ntBASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gm17535J3KMR8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Gm17535J3KMR8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm17535J3KMR8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.19■□□□□ 0.98
Gm17535J3KMR8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm17535J3KMR8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm17535J3KMR8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm17535J3KMR8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm17535J3KMR8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.16■□□□□ 0.98
Gm17535J3KMR8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.16■□□□□ 0.98
Gm17535J3KMR8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm17535J3KMR8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Gm17535J3KMR8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm17535J3KMR8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm17535J3KMR8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm17535J3KMR8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms