Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
NpcdF8VQB8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Gm10812-201ENSMUST00000099864 546 ntBASIC23.92■■□□□ 1.42
NpcdF8VQB8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NpcdF8VQB8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Gm7290-201ENSMUST00000104990 617 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Gm12918-201ENSMUST00000120234 636 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Gm15710-201ENSMUST00000121821 636 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Gm5075-201ENSMUST00000196916 622 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.91■■□□□ 1.42
NpcdF8VQB8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.91■■□□□ 1.42
NpcdF8VQB8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NpcdF8VQB8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NpcdF8VQB8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.9■■□□□ 1.42
NpcdF8VQB8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NpcdF8VQB8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NpcdF8VQB8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NpcdF8VQB8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NpcdF8VQB8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.89■■□□□ 1.42
NpcdF8VQB8 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.89■■□□□ 1.42
NpcdF8VQB8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
NpcdF8VQB8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
NpcdF8VQB8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.89■■□□□ 1.41
NpcdF8VQB8 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.89■■□□□ 1.41
NpcdF8VQB8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
NpcdF8VQB8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NpcdF8VQB8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
NpcdF8VQB8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
NpcdF8VQB8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Gm20049-201ENSMUST00000219950 730 ntBASIC23.88■■□□□ 1.41
NpcdF8VQB8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.88■■□□□ 1.41
NpcdF8VQB8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NpcdF8VQB8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NpcdF8VQB8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NpcdF8VQB8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
NpcdF8VQB8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NpcdF8VQB8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Gm13148-201ENSMUST00000118892 745 ntBASIC23.86■■□□□ 1.41
NpcdF8VQB8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.86■■□□□ 1.41
NpcdF8VQB8 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.86■■□□□ 1.41
NpcdF8VQB8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NpcdF8VQB8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
NpcdF8VQB8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Mir6982-201ENSMUST00000184354 68 ntBASIC23.84■■□□□ 1.41
NpcdF8VQB8 Gm5408-201ENSMUST00000197998 747 ntBASIC23.84■■□□□ 1.41
NpcdF8VQB8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.84■■□□□ 1.41
NpcdF8VQB8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NpcdF8VQB8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms