Protein–RNA interactions for Protein: E9Q9P8

Rdh16f1, RDH16 family member 1, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f1E9Q9P8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rdh16f1E9Q9P8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh16f1E9Q9P8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rdh16f1E9Q9P8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rdh16f1E9Q9P8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rdh16f1E9Q9P8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rdh16f1E9Q9P8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rdh16f1E9Q9P8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f1E9Q9P8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f1E9Q9P8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rdh16f1E9Q9P8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f1E9Q9P8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.52■□□□□ 0.39
Rdh16f1E9Q9P8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh16f1E9Q9P8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.51■□□□□ 0.39
Rdh16f1E9Q9P8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms