Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28043E0CXC2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28043E0CXC2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm28043E0CXC2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gm28043E0CXC2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Gm14117-201ENSMUST00000122417 843 ntBASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gm28043E0CXC2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28043E0CXC2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28043E0CXC2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28043E0CXC2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28043E0CXC2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms