Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.44■■□□□ 1.02
Ptchd4B9EKX1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Gm27801-201ENSMUST00000184174 223 ntBASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ptchd4B9EKX1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Gm9988-201ENSMUST00000069786 435 ntBASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptchd4B9EKX1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ptchd4B9EKX1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
Ptchd4B9EKX1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptchd4B9EKX1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.39■■□□□ 1.01
Ptchd4B9EKX1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.39■■□□□ 1.01
Ptchd4B9EKX1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptchd4B9EKX1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.39■■□□□ 1.01
Ptchd4B9EKX1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptchd4B9EKX1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptchd4B9EKX1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptchd4B9EKX1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ptchd4B9EKX1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Gm13234-201ENSMUST00000120010 747 ntBASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptchd4B9EKX1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms