Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col4a6B1AVK5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a6B1AVK5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Col4a6B1AVK5 Mir5133-201ENSMUST00000174955 77 ntBASIC20.83■□□□□ 0.92
Col4a6B1AVK5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col4a6B1AVK5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col4a6B1AVK5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.81■□□□□ 0.92
Col4a6B1AVK5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col4a6B1AVK5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a6B1AVK5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a6B1AVK5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col4a6B1AVK5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Col4a6B1AVK5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.8■□□□□ 0.92
Col4a6B1AVK5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.79■□□□□ 0.92
Col4a6B1AVK5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Col4a6B1AVK5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col4a6B1AVK5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col4a6B1AVK5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col4a6B1AVK5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Col4a6B1AVK5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col4a6B1AVK5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col4a6B1AVK5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col4a6B1AVK5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col4a6B1AVK5 Gm20760-201ENSMUST00000179197 648 ntBASIC20.72■□□□□ 0.91
Col4a6B1AVK5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.72■□□□□ 0.91
Col4a6B1AVK5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms