Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm11127A7VMS2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Gm5921-201ENSMUST00000075898 882 ntBASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm11127A7VMS2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm11127A7VMS2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm11127A7VMS2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Gm11127A7VMS2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm11127A7VMS2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm11127A7VMS2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Gm11127A7VMS2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm11127A7VMS2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm11127A7VMS2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Gm43566-201ENSMUST00000196851 808 ntBASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm11127A7VMS2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm11127A7VMS2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Gm11127A7VMS2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.39■□□□□ 0.37
Gm11127A7VMS2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms