Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Gm37563-201ENSMUST00000192580 1513 ntBASIC10.73□□□□□ -0.69
Ubr4A2AN08 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ubr4A2AN08 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ubr4A2AN08 AC122428.3-201ENSMUST00000215551 2290 ntBASIC10.72□□□□□ -0.69
Ubr4A2AN08 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.72□□□□□ -0.69
Ubr4A2AN08 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.72□□□□□ -0.69
Ubr4A2AN08 Gm10167-201ENSMUST00000150411 1479 ntBASIC10.72□□□□□ -0.69
Ubr4A2AN08 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Gm13146-201ENSMUST00000118508 780 ntBASIC10.72□□□□□ -0.69
Ubr4A2AN08 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ubr4A2AN08 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.71□□□□□ -0.69
Ubr4A2AN08 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Gm27045-201ENSMUST00000182145 1402 ntBASIC10.71□□□□□ -0.69
Ubr4A2AN08 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.71□□□□□ -0.69
Ubr4A2AN08 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ubr4A2AN08 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC10.71□□□□□ -0.69
Ubr4A2AN08 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ubr4A2AN08 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ubr4A2AN08 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.7□□□□□ -0.7
Ubr4A2AN08 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr4A2AN08 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Gm43514-201ENSMUST00000198852 424 ntBASIC10.69□□□□□ -0.7
Ubr4A2AN08 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr4A2AN08 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.68□□□□□ -0.7
Ubr4A2AN08 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Gm10698-201ENSMUST00000182663 604 ntBASIC10.68□□□□□ -0.7
Ubr4A2AN08 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr4A2AN08 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.67□□□□□ -0.7
Ubr4A2AN08 Mir1199-201ENSMUST00000117015 119 ntBASIC10.67□□□□□ -0.7
Ubr4A2AN08 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms