Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd7A2AJK6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd7A2AJK6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd7A2AJK6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd7A2AJK6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd7A2AJK6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd7A2AJK6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chd7A2AJK6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.89■□□□□ 0.77
Chd7A2AJK6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.89■□□□□ 0.77
Chd7A2AJK6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd7A2AJK6 Gm6365-201ENSMUST00000054711 744 ntBASIC19.89■□□□□ 0.77
Chd7A2AJK6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd7A2AJK6 Trmt13-210ENSMUST00000198454 880 ntBASIC19.89■□□□□ 0.77
Chd7A2AJK6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd7A2AJK6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd7A2AJK6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd7A2AJK6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chd7A2AJK6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.87■□□□□ 0.77
Chd7A2AJK6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd7A2AJK6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.86■□□□□ 0.77
Chd7A2AJK6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Chd7A2AJK6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.85■□□□□ 0.77
Chd7A2AJK6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Gm26524-201ENSMUST00000192339 390 ntBASIC19.84■□□□□ 0.77
Chd7A2AJK6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd7A2AJK6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd7A2AJK6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd7A2AJK6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd7A2AJK6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Chd7A2AJK6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chd7A2AJK6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd7A2AJK6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.82■□□□□ 0.76
Chd7A2AJK6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.81■□□□□ 0.76
Chd7A2AJK6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd7A2AJK6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.81■□□□□ 0.76
Chd7A2AJK6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chd7A2AJK6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd7A2AJK6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms