Protein–RNA interactions for Protein: A2AF28

Slc25a53, MCG115034, isoform CRA_c, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc25a53A2AF28 Gm5874-201ENSMUST00000096101 508 ntBASIC17.68■□□□□ 0.42
Slc25a53A2AF28 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc25a53A2AF28 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc25a53A2AF28 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Slc25a53A2AF28 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Gm40848-201ENSMUST00000221998 324 ntBASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Gm10493-201ENSMUST00000097270 612 ntBASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc25a53A2AF28 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc25a53A2AF28 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc25a53A2AF28 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc25a53A2AF28 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc25a53A2AF28 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc25a53A2AF28 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc25a53A2AF28 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc25a53A2AF28 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc25a53A2AF28 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms