Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Gm43566-201ENSMUST00000196851 808 ntBASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav12d-1A0N8R0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav12d-1A0N8R0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Trav12d-1A0N8R0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Trav12d-1A0N8R0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav12d-1A0N8R0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Gm13238-201ENSMUST00000117655 780 ntBASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Mir6236-201ENSMUST00000184437 123 ntBASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav12d-1A0N8R0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav12d-1A0N8R0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav12d-1A0N8R0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Gm10232-201ENSMUST00000089221 720 ntBASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav12d-1A0N8R0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav12d-1A0N8R0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms