Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv17A0A140T8P8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv17A0A140T8P8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv17A0A140T8P8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Trbv17A0A140T8P8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trbv17A0A140T8P8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv17A0A140T8P8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.08■□□□□ 0.01
Trbv17A0A140T8P8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv17A0A140T8P8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv17A0A140T8P8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trbv17A0A140T8P8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trbv17A0A140T8P8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trbv17A0A140T8P8 Gm9847-201ENSMUST00000052528 599 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms