Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv6-25A0A140T8N7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
Igkv6-25A0A140T8N7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Igkv6-25A0A140T8N7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv6-25A0A140T8N7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Igkv6-25A0A140T8N7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Igkv6-25A0A140T8N7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv6-25A0A140T8N7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Igkv6-25A0A140T8N7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv6-25A0A140T8N7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Reep4-203ENSMUST00000226563 1444 ntBASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv6-25A0A140T8N7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv6-25A0A140T8N7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv6-25A0A140T8N7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv6-25A0A140T8N7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.58■□□□□ 0.56
Igkv6-25A0A140T8N7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.58■□□□□ 0.56
Igkv6-25A0A140T8N7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv6-25A0A140T8N7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms