Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc194A0A140LIT1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc194A0A140LIT1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Gm15546-201ENSMUST00000122095 826 ntBASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Mir6236-201ENSMUST00000184437 123 ntBASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc194A0A140LIT1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc194A0A140LIT1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc194A0A140LIT1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc194A0A140LIT1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc194A0A140LIT1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc194A0A140LIT1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Gm43530-201ENSMUST00000195920 274 ntBASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc194A0A140LIT1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Etf1-202ENSMUST00000180351 108 ntBASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc194A0A140LIT1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.64■□□□□ 0.74
Ccdc194A0A140LIT1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc194A0A140LIT1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc194A0A140LIT1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc194A0A140LIT1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc194A0A140LIT1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc194A0A140LIT1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms