Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm45444-201ENSMUST00000211394 898 ntBASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Cap2-205ENSMUST00000225824 1634 ntBASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.58□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav13d-4A0A0G2JFX3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms