Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav19A0A0B4J1K4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Mir6538-201ENSMUST00000183713 110 ntBASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav19A0A0B4J1K4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav19A0A0B4J1K4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav19A0A0B4J1K4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav19A0A0B4J1K4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav19A0A0B4J1K4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav19A0A0B4J1K4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Gm10399-202ENSMUST00000202768 748 ntBASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Gm45444-201ENSMUST00000211394 898 ntBASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav19A0A0B4J1K4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav19A0A0B4J1K4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms