Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav9-4A0A0B4J1K2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav9-4A0A0B4J1K2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav9-4A0A0B4J1K2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm43137-201ENSMUST00000198052 594 ntBASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav9-4A0A0B4J1K2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav9-4A0A0B4J1K2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms