Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav11A0A0B4J1J9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav11A0A0B4J1J9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.58□□□□□ -0.23
Trav11A0A0B4J1J9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav11A0A0B4J1J9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav11A0A0B4J1J9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Gm11175-201ENSMUST00000116172 543 ntBASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav11A0A0B4J1J9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav11A0A0B4J1J9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav11A0A0B4J1J9 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Gm12366-201ENSMUST00000121722 873 ntBASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Gm5786-201ENSMUST00000085368 882 ntBASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trav11A0A0B4J1J9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav11A0A0B4J1J9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav11A0A0B4J1J9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trav11A0A0B4J1J9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Trav11A0A0B4J1J9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms