Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Gm40881-201ENSMUST00000223397 166 ntBASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv16A0A0B4J1H3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trbv16A0A0B4J1H3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trbv16A0A0B4J1H3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trbv16A0A0B4J1H3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.32□□□□□ -0.12
Trbv16A0A0B4J1H3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv16A0A0B4J1H3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv16A0A0B4J1H3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv16A0A0B4J1H3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms