Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.59■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.58■□□□□ 0.41
Trbv12-1A0A0B4J1H0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm12251-201ENSMUST00000117893 792 ntBASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Mir7075-201ENSMUST00000184187 82 ntBASIC17.57■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Gm45417-201ENSMUST00000209533 758 ntBASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-1A0A0B4J1H0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms