Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv5A0A0B4J1G9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv5A0A0B4J1G9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Gm16437-201ENSMUST00000025669 507 ntBASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv5A0A0B4J1G9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv5A0A0B4J1G9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv5A0A0B4J1G9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Scarna2-201ENSMUST00000157560 414 ntBASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv5A0A0B4J1G9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Gm9806-201ENSMUST00000051080 552 ntBASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv5A0A0B4J1G9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv5A0A0B4J1G9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv5A0A0B4J1G9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv5A0A0B4J1G9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Trbv5A0A0B4J1G9 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.83■□□□□ 0.13
Trbv5A0A0B4J1G9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trbv5A0A0B4J1G9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv5A0A0B4J1G9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms