Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-47A0A0A6YY41 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Gm45102-201ENSMUST00000207427 857 ntBASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.34■□□□□ 0.21
Ighv1-47A0A0A6YY41 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-47A0A0A6YY41 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-47A0A0A6YY41 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ighv1-47A0A0A6YY41 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-47A0A0A6YY41 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-47A0A0A6YY41 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-47A0A0A6YY41 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ighv1-47A0A0A6YY41 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gm9870-201ENSMUST00000063874 645 ntBASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-47A0A0A6YY41 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gm14117-201ENSMUST00000122417 843 ntBASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-47A0A0A6YY41 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gm22238-201ENSMUST00000175222 88 ntBASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-47A0A0A6YY41 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-47A0A0A6YY41 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-47A0A0A6YY41 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-47A0A0A6YY41 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-47A0A0A6YY41 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Ighv1-47A0A0A6YY41 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-47A0A0A6YY41 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
Ighv1-47A0A0A6YY41 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-47A0A0A6YY41 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms