Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm22238-201ENSMUST00000175222 88 ntBASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-18A0A0A6YXN4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.02■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-18A0A0A6YXN4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms