Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-20A0A0A6YX66 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-20A0A0A6YX66 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-20A0A0A6YX66 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-20A0A0A6YX66 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-20A0A0A6YX66 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-20A0A0A6YX66 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-20A0A0A6YX66 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 Smad6-203ENSMUST00000179458 273 ntBASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-20A0A0A6YX66 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Notumos-201ENSMUST00000151998 2659 ntBASIC16■□□□□ 0.15
Ighv1-20A0A0A6YX66 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gm43060-201ENSMUST00000200621 289 ntBASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-20A0A0A6YX66 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-20A0A0A6YX66 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gm40848-201ENSMUST00000221998 324 ntBASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-20A0A0A6YX66 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.96■□□□□ 0.15
Ighv1-20A0A0A6YX66 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ighv1-20A0A0A6YX66 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-20A0A0A6YX66 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ighv1-20A0A0A6YX66 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms