Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv21A0A0A6YX06 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trbv21A0A0A6YX06 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Trbv21A0A0A6YX06 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv21A0A0A6YX06 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.38■□□□□ 0.53
Trbv21A0A0A6YX06 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv21A0A0A6YX06 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv21A0A0A6YX06 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trbv21A0A0A6YX06 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv21A0A0A6YX06 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv21A0A0A6YX06 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv21A0A0A6YX06 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv21A0A0A6YX06 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv21A0A0A6YX06 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv21A0A0A6YX06 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trbv21A0A0A6YX06 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Gm42790-201ENSMUST00000201268 969 ntBASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Gm9847-201ENSMUST00000052528 599 ntBASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.32■□□□□ 0.52
Trbv21A0A0A6YX06 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv21A0A0A6YX06 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Trbv21A0A0A6YX06 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv21A0A0A6YX06 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv21A0A0A6YX06 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbv21A0A0A6YX06 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms