Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbc1A0A0A6YWV4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trbc1A0A0A6YWV4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbc1A0A0A6YWV4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbc1A0A0A6YWV4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbc1A0A0A6YWV4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbc1A0A0A6YWV4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbc1A0A0A6YWV4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbc1A0A0A6YWV4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm45417-201ENSMUST00000209533 758 ntBASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbc1A0A0A6YWV4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Mir6236-201ENSMUST00000184437 123 ntBASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbc1A0A0A6YWV4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbc1A0A0A6YWV4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbc1A0A0A6YWV4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms