Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6d-5A0A075B6B9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-5A0A075B6B9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-5A0A075B6B9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-5A0A075B6B9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6d-5A0A075B6B9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Trav6d-5A0A075B6B9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6d-5A0A075B6B9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trav6d-5A0A075B6B9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6d-5A0A075B6B9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm10420-201ENSMUST00000121713 882 ntBASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6d-5A0A075B6B9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6d-5A0A075B6B9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6d-5A0A075B6B9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-5A0A075B6B9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6d-5A0A075B6B9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms