Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-5A0A075B6B5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-5A0A075B6B5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-5A0A075B6B5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-5A0A075B6B5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-5A0A075B6B5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-5A0A075B6B5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Scarna2-201ENSMUST00000157560 414 ntBASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Gm16437-201ENSMUST00000025669 507 ntBASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-5A0A075B6B5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Trav6-5A0A075B6B5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-5A0A075B6B5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-5A0A075B6B5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6-5A0A075B6B5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms