Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Gm14117-201ENSMUST00000122417 843 ntBASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav9d-3A0A075B695 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav9d-3A0A075B695 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.09□□□□□ -0.15
Trav9d-3A0A075B695 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav9d-3A0A075B695 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav9d-3A0A075B695 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Notumos-201ENSMUST00000151998 2659 ntBASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Gm22238-201ENSMUST00000175222 88 ntBASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9d-3A0A075B695 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Gm45102-201ENSMUST00000207427 857 ntBASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9d-3A0A075B695 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-3A0A075B695 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9d-3A0A075B695 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trav9d-3A0A075B695 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms