Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav18A0A075B656 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav18A0A075B656 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav18A0A075B656 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Trav18A0A075B656 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.2■□□□□ 0.18
Trav18A0A075B656 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav18A0A075B656 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav18A0A075B656 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.19■□□□□ 0.18
Trav18A0A075B656 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav18A0A075B656 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav18A0A075B656 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.18■□□□□ 0.18
Trav18A0A075B656 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav18A0A075B656 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav18A0A075B656 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.17■□□□□ 0.18
Trav18A0A075B656 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Mir6236-201ENSMUST00000184437 123 ntBASIC16.16■□□□□ 0.18
Trav18A0A075B656 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.16■□□□□ 0.18
Trav18A0A075B656 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav18A0A075B656 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Gm9870-201ENSMUST00000063874 645 ntBASIC16.15■□□□□ 0.18
Trav18A0A075B656 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trav18A0A075B656 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav18A0A075B656 Gm43530-201ENSMUST00000195920 274 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms