Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav16A0A075B653 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav16A0A075B653 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav16A0A075B653 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav16A0A075B653 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav16A0A075B653 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav16A0A075B653 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav16A0A075B653 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav16A0A075B653 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav16A0A075B653 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.21■□□□□ 0.02
Trav16A0A075B653 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav16A0A075B653 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav16A0A075B653 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav16A0A075B653 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms