Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5-4A0A075B652 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5-4A0A075B652 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5-4A0A075B652 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5-4A0A075B652 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5-4A0A075B652 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5-4A0A075B652 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Gm9870-201ENSMUST00000063874 645 ntBASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5-4A0A075B652 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5-4A0A075B652 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5-4A0A075B652 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Gm9959-201ENSMUST00000068277 390 ntBASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5-4A0A075B652 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trav5-4A0A075B652 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav5-4A0A075B652 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms