Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm45444-201ENSMUST00000211394 898 ntBASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav15-2-dv6-2A0A075B650 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm10399-202ENSMUST00000202768 748 ntBASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms