Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav6-7-dv9A0A075B639 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm14117-201ENSMUST00000122417 843 ntBASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6-7-dv9A0A075B639 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6-7-dv9A0A075B639 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6-7-dv9A0A075B639 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6-7-dv9A0A075B639 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.52■□□□□ 0.39
Trav6-7-dv9A0A075B639 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6-7-dv9A0A075B639 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6-7-dv9A0A075B639 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6-7-dv9A0A075B639 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms