Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.83■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trav15d-1-dv6d-1A0A075B624 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav15d-1-dv6d-1A0A075B624 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms