Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-6A0A075B603 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-6A0A075B603 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Gm45444-201ENSMUST00000211394 898 ntBASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Cap2-205ENSMUST00000225824 1634 ntBASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav6-6A0A075B603 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-6A0A075B603 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav6-6A0A075B603 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Rarb-207ENSMUST00000225921 2756 ntBASIC14.67□□□□□ -0.06
Trav6-6A0A075B603 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6-6A0A075B603 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6-6A0A075B603 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms