Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smarcd2Q99JR8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.52□□□□□ -0.72
Smarcd2Q99JR8 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm11800-201ENSMUST00000120050 579 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm12221-201ENSMUST00000125096 1131 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm26957-201ENSMUST00000182645 977 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm38103-201ENSMUST00000191707 864 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm5845-201ENSMUST00000195812 796 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm7924-201ENSMUST00000203975 785 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm44173-201ENSMUST00000204316 132 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.52□□□□□ -0.73
Smarcd2Q99JR8 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm8806-201ENSMUST00000120076 1407 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm5046-201ENSMUST00000100608 611 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm12733-201ENSMUST00000119871 767 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm23479-201ENSMUST00000158876 122 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm6773-201ENSMUST00000182377 878 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smarcd2Q99JR8 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms