Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm18584-201ENSMUST00000203098 964 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm44551-201ENSMUST00000208804 171 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm33882-201ENSMUST00000208990 651 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 AC122891.1-201ENSMUST00000218671 268 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 AC154252.2-201ENSMUST00000223593 767 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 AC121960.1-201ENSMUST00000227982 564 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Stx16-202ENSMUST00000087908 3865 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Etos1-201ENSMUST00000057134 2015 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Gm42822-201ENSMUST00000200507 1529 ntBASIC8.49□□□□□ -1.05
Trim63Q38HM4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Trim63Q38HM4 Ccnc-202ENSMUST00000102997 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Cabyr-206ENSMUST00000186263 2125 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm18638-201ENSMUST00000211293 1773 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Lif-202ENSMUST00000066283 4026 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Tcaf2-201ENSMUST00000031879 4497 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Olfr1221-203ENSMUST00000213404 2778 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Lysmd4-204ENSMUST00000207823 3772 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Sdr42e1-202ENSMUST00000173522 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Irx6-202ENSMUST00000167261 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm20743-202ENSMUST00000194322 2830 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm11956-201ENSMUST00000119525 512 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm8215-201ENSMUST00000120627 990 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm13874-202ENSMUST00000135348 941 ntTSL 3 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm5342-201ENSMUST00000181982 1003 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm45856-201ENSMUST00000212752 416 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Abhd11os-203ENSMUST00000222613 363 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 AC154616.1-201ENSMUST00000226995 804 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.48□□□□□ -1.05
Trim63Q38HM4 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm42575-201ENSMUST00000202942 1674 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 Gm26583-201ENSMUST00000181436 3684 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Trim63Q38HM4 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms