Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smpd1Q04519 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Smpd1Q04519 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.7□□□□□ -0.54
Smpd1Q04519 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smpd1Q04519 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smpd1Q04519 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.7□□□□□ -0.54
Smpd1Q04519 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Smpd1Q04519 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smpd1Q04519 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm23745-201ENSMUST00000104230 125 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Mir669d-2-201ENSMUST00000116854 86 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm23429-201ENSMUST00000122486 149 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm12906-201ENSMUST00000154610 441 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smpd1Q04519 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm6677-201ENSMUST00000195100 441 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm43396-201ENSMUST00000197506 706 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Trav11n-201ENSMUST00000200113 343 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm44432-201ENSMUST00000203342 938 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm44137-201ENSMUST00000203670 367 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm44615-201ENSMUST00000206548 358 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 AC167192.1-201ENSMUST00000225908 139 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 AC080021.1-201ENSMUST00000228104 700 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.69□□□□□ -0.54
Smpd1Q04519 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smpd1Q04519 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smpd1Q04519 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smpd1Q04519 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Gm12947-201ENSMUST00000116114 420 ntBASIC11.68□□□□□ -0.54
Smpd1Q04519 Gm9435-201ENSMUST00000120379 877 ntBASIC11.68□□□□□ -0.54
Smpd1Q04519 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smpd1Q04519 Gm16459-201ENSMUST00000121443 686 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms