Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm37390-201ENSMUST00000192452 872 ntBASIC9.91□□□□□ -0.82
Cdx2P43241 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 AC154643.1-201ENSMUST00000225643 625 ntBASIC9.91□□□□□ -0.82
Cdx2P43241 CT025618.1-201ENSMUST00000227409 1279 ntBASIC9.91□□□□□ -0.82
Cdx2P43241 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Cdx2P43241 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Cdx2P43241 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Cdx2P43241 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm8163-201ENSMUST00000122020 1060 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm16581-201ENSMUST00000160730 991 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Scgb1b21-201ENSMUST00000170232 268 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm4812-201ENSMUST00000182847 993 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Mir8104-201ENSMUST00000185165 101 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm28381-201ENSMUST00000188403 193 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Gm2021-201ENSMUST00000190623 464 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm18894-201ENSMUST00000198794 694 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Gm44716-201ENSMUST00000209007 710 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm18119-201ENSMUST00000219972 616 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 CT025689.5-201ENSMUST00000224316 986 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 AC161581.1-201ENSMUST00000228696 318 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Cdx2P43241 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Cdx2P43241 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.9□□□□□ -0.82
Cdx2P43241 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Cdx2P43241 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Cdx2P43241 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Cdx2P43241 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Cdx2P43241 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Gm44547-201ENSMUST00000207793 1446 ntBASIC9.9□□□□□ -0.83
Cdx2P43241 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Cdx2P43241 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Cdx2P43241 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Cdx2P43241 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Cdx2P43241 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms