Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Strip2-202ENSMUST00000115224 3524 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cd28P31041 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Gm13019-201ENSMUST00000120000 276 ntBASIC9.07□□□□□ -0.96
Cd28P31041 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.07□□□□□ -0.96
Cd28P31041 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Mir6927-201ENSMUST00000184494 71 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Gm19353-201ENSMUST00000184561 445 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.07□□□□□ -0.96
Cd28P31041 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.07□□□□□ -0.96
Cd28P31041 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Cd28P31041 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Gm44304-201ENSMUST00000200509 145 ntBASIC9.07□□□□□ -0.96
Cd28P31041 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Gm17831-201ENSMUST00000205579 900 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cd28P31041 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cd28P31041 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cd28P31041 Gm37484-201ENSMUST00000195378 2523 ntBASIC9.07□□□□□ -0.96
Cd28P31041 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cd28P31041 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cd28P31041 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gtpbp8-204ENSMUST00000162512 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cd28P31041 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Ccdc40-202ENSMUST00000053440 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm12645-201ENSMUST00000117297 275 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm7857-201ENSMUST00000117957 358 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Tnxa-201ENSMUST00000173277 2975 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm22876-201ENSMUST00000175450 298 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.06□□□□□ -0.96
Cd28P31041 Gm7880-201ENSMUST00000203748 871 ntBASIC9.06□□□□□ -0.96
Cd28P31041 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.06□□□□□ -0.96
Cd28P31041 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Cdkl1-201ENSMUST00000021377 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.06□□□□□ -0.96
Cd28P31041 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Nupl1-201ENSMUST00000225805 3602 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Cd28P31041 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.06□□□□□ -0.96
Cd28P31041 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Cd28P31041 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.06□□□□□ -0.96
Cd28P31041 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cd28P31041 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms