Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.02□□□□□ -0.81
Fv4P11370 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.02□□□□□ -0.81
Fv4P11370 Gm25514-201ENSMUST00000083860 135 ntBASIC10.02□□□□□ -0.81
Fv4P11370 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Fv4P11370 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Fv4P11370 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 2810471M01Rik-201ENSMUST00000146554 1597 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
Fv4P11370 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Fv4P11370 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Fv4P11370 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Gm15602-201ENSMUST00000116162 465 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Gm6500-201ENSMUST00000119412 451 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm16441-201ENSMUST00000138176 924 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Gm6038-201ENSMUST00000154310 948 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm24809-201ENSMUST00000175318 271 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Mir6998-201ENSMUST00000183343 64 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm8083-201ENSMUST00000203976 475 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.01□□□□□ -0.81
Fv4P11370 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Gm18514-201ENSMUST00000218980 436 ntBASIC10.01□□□□□ -0.81
Fv4P11370 AC119177.2-201ENSMUST00000226699 629 ntBASIC10.01□□□□□ -0.81
Fv4P11370 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC10.01□□□□□ -0.81
Fv4P11370 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.01□□□□□ -0.81
Fv4P11370 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Fv4P11370 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Fv4P11370 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10□□□□□ -0.81
Fv4P11370 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Fv4P11370 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Fv4P11370 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms