Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm5298-201ENSMUST00000201122 892 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm8557-201ENSMUST00000220777 475 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm26782-203ENSMUST00000227103 751 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 AC154683.1-201ENSMUST00000228409 1284 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trub1Q8C0D0 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm11993-201ENSMUST00000121861 820 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm9515-201ENSMUST00000200276 647 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm43167-201ENSMUST00000202001 1606 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trub1Q8C0D0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trub1Q8C0D0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm20953-201ENSMUST00000216399 2614 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm11475-201ENSMUST00000118482 476 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm14993-201ENSMUST00000121180 164 ntBASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC10.7□□□□□ -0.7
Trub1Q8C0D0 Mir7032-201ENSMUST00000185154 79 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms