Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdh19Q80TF3 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm42995-201ENSMUST00000197047 1330 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm8872-201ENSMUST00000197475 1341 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm7052-201ENSMUST00000167568 1512 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm24279-201ENSMUST00000104236 131 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm15258-201ENSMUST00000153801 741 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm11942-201ENSMUST00000180255 345 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm26943-201ENSMUST00000182295 957 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm7572-201ENSMUST00000182616 766 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm8643-201ENSMUST00000195228 625 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm37017-201ENSMUST00000195266 747 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm34272-201ENSMUST00000208886 253 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm8557-201ENSMUST00000220777 475 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 CT025603.1-201ENSMUST00000224040 448 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdh19Q80TF3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm6783-201ENSMUST00000120916 1437 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm14659-201ENSMUST00000117667 843 ntBASIC10.34□□□□□ -0.75
Pcdh19Q80TF3 Gm6238-201ENSMUST00000120999 465 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms