Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vps54Q5SPW0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm37036-201ENSMUST00000192836 2506 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 A1cf-204ENSMUST00000224564 1432 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm13303-201ENSMUST00000117125 1284 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm7541-201ENSMUST00000118361 535 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm5395-201ENSMUST00000121650 915 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm8525-201ENSMUST00000189674 861 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm8643-201ENSMUST00000195228 625 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.48□□□□□ -0.41
Vps54Q5SPW0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vps54Q5SPW0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm6713-201ENSMUST00000216137 1446 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm16581-201ENSMUST00000160730 991 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm18443-201ENSMUST00000185358 556 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm28179-201ENSMUST00000188365 613 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm5311-201ENSMUST00000203518 709 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm44388-201ENSMUST00000204350 258 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm18862-201ENSMUST00000204643 933 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 AC154213.1-201ENSMUST00000228234 583 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm37567-201ENSMUST00000193241 2279 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm43737-201ENSMUST00000199915 2740 ntBASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vps54Q5SPW0 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vps54Q5SPW0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms